QSIprep Reconstruction Docker vs. Singularity

1

Hi,

With QSIprep reconstruction pipelines - can I only run with Docker or can I run through singularity?

Thanks in advance,
Tej

2

Hi Tej,

You can use Singularity too.

singularity run -e qsiprep.img $ARGUMENTS_GO_HERE

Best,
Steven

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3

Both are okay.

Just pull the docker image through singularity to run in singularity (often in an HPC case).

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