Summary of what happened:
I ran mapmri in QSIrecon and separately with DiPy.
I noticed that DiPy produces the NG scalar (non-gaussianity), but qsirecon does not produce this.
Is there a way to add the ng scalar to the qsirecon pipeline?
Thank you.
{ "description": "Reconstruct dwis using Dipy, then convert to mrtrix and dsi studio formats",
"space": "T1w",
"name": "dipy_mapmri",
"atlases": [ ],
"nodes": [
{
"name": "mapmri_recon",
"software": "Dipy",
"action": "MAPMRI_reconstruction",
"input": "qsiprep",
"output_suffix": "MAPMRI",
"parameters": {
"radial_order": 6,
"laplacian_regularization": true,
"laplacian_weighting": 0.2,
"anisotropic_scaling": false,
"bval_threshold": 2000,
"dti_scale_estimation": false,
"write_mif": true,
"write_fibgz": true
}
}
]
}