Sorry, it looks like latest is just the most recent release. You need “unstable”, which has the most recent unreleased, but merged, changes.
Oh great - thanks - will try that!
Hi @tsalo,
I am having a related problem with filtered framewise displacement. Please let me know if you would prefer for me to open a new post.
I have specified a --motion-filter-type and --fd-thresh but my motion.tsv does not include a ‘framewise_displacement_filter’ column. The motion.json does include a description of the framewise_displacement_filter column, so I believe on should be created. I am running xcp-d 0.10.6.
Am I missing a parameter in the command? See below:
/usr/local/miniconda/bin/xcp_d --verbose --participant_label NU013xSA0004 --input-type fmriprep --nthreads 16 --mem_gb 48 --smoothing 3 --despike y --nuisance-regressors acompcor_gsr --dummy-scans 4 --bpf-order 2 --motion-filter-type notch --band-stop-min 10 --band-stop-max 30 --lower-bpf 0.01 --upper-bpf 0.1 --fd-thresh 0.4 --abcc-qc --file-format cifti --min-coverage 0.5 --warp-surfaces-native2std --linc-qc n --combine-runs n --output-type censored --create-matrices all --fs-license-file /gpfs/data/martersteck-lab/env/lib/FreeSurfer/freesurfer-7.2.0/license.txt --work_dir /scratch/sreenik/xcpd_work/sub-NU013xSA0004_ses-140602 --mode none /gpfs/data/martersteck-lab/processed/sa_u19/derivatives/xcp_d_lndir/sub-NU013xSA0004_ses-140602 /gpfs/data/martersteck-lab/processed/sa_u19/derivatives/xcp_d-0.10.6/ participant