I’ve been trying to use the generated config file from pyAFQ and it works but I would love to resample down to just having 30 nodes across each tract instead of the default 100. The config file runs just fine but I can’t seem to get the amount of nodes to change no matter what input I adjust. I’ve seen this mentioned as an option in the API on the tutorials (AFQ API — AFQ 1.1 documentation) but was wondering if it was possible to do using just the config file through the CLI. I’m currently using the dev version of pyAFQ but have tried on both versions with no success. I’m hesitant to make the commitment over to the API but maybe that is the best option?
Command used (and if a helper script was used, a link to the helper script or the command generated):
# Number of points to resample streamlines to. # Default: 100 n_points = 30
This was the code in the config file I assumed would adjust the nodes. But didn’t seem to help.
Hoping this is something simple I’m just totally missing! Thanks for any help or advice and sorry in advance if my post is not formatted correctly, I’m very new