Hello!!
We are processing PCASL using Aslprep through singularity container. We have the following BIDS structure folders’:
BIDS/
sub-100/
ses-1/
perf
anat
ses-6/
perf
anat
We want to process only ses-1, is there any command to do it?
You can use the BIDS filter file (--bids-filter-file). It’s a JSON file with different fields that ASLPrep will look for and BIDS entity filters. Here’s an example filter file. aslprep/aslprep/tests/data/examples_pcasl_singlepld_siemens_filter.json at 8beeea11fb22931489f200a593902b086782713c · PennLINC/aslprep · GitHub