Spinal Cord Toolbox (SCT) - New release v5.2.0

Hello everyone,

I wanted to let you know that the NeuroPoly lab has released version 5.2 of SCT, our comprehensive open-source neuroimaging software application to process & analyze spinal cord MRI data.

This release is a minor feature update over v5.1.0. Here are a few notable changes included in this release…

New features and enhancements:

  • sct_deepseg: New segmentation model: GM and WM for exvivo DWI data (thanks to the University of Queensland).
  • sct_image,sct_straighten_spinalcord: Check qform and sforms match first.

Partial summary of bugs fixed:

  • Fixed header datatype mismatch bug which caused landmark matching to fail during registration.
  • Fixed bug which caused inaccurate Size[vox] calculation in ‘-method map’ and ‘-method ml’ in sct_extract_metric.
  • Fix recently-introduced faulty slice index comparison.
  • sct_register_to_template: Enforce UINT8 when resampling labels for register to template.

You can check out the full change log for a more detailed list of changes, including link to the related pull requests.

If you’d like to try out SCT, check out the installation instructions.

If you have any questions or feature requests, please post in the SCT forum.

Happy processing!

The Spinal Cord Toolbox Team

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