Dear fmriprep developers，
Thank you so much for such a wonderful tool!
I was trying to replace the old toolchains used by our lab with fmriprep these days, and found that there are something inconvenient compared with, e.g., FSL. So I need your help.
In fmriprep 1.4.0, the output of each individual contains T1w files in “subject” space, aparcaseg_dseg and aseg_dseg labels in “subject” space. There are also EPI files in MNI space, as well as aparcaseg_dseg and aseg_dseg labels in MNI space but for each run.
You know, sometimes we need the standard space T1w image as background (for rendering results), I was wondering if there is any way to obtain the template T1w image directly from fmriprep (since fmriprep used that file, it should be already downloaded), but not indirectly clone from GitHub, install datalad et. al., just for this template?
Another question is, are there any corresponding label file for the standard space T1w image (in MNI space)? Those label files in func folder are for each run, and their resolution is not very high if I need to extract ROIs based on them.
Thank you so much for your time.