T1w chopped off in fmriprep 1.2.3 versus fmriprep 1.4



I observed that in some subjects the _desc-preproc_T1w.nii.gz output after anatomical processing comes out chopped off in version 1.2.3 (right) whereas it looks fine in version 1.4.0 (left).

Any ideas why this might be? On the other hand the _space-MNI152NLin6Asym_desc-preproc_T1w.nii.gz looks fine in v1.2.3 despite the weird issue with the preprocessed T1w output.


Hi @mnarayan, can you share some of those subject’s T1w images so that we can replicate the issue?