Hi Everyone!
I’m looking to run fmriprep for a dataset with 3mm(res-3) but when finished running although some files were created, the output text files is showing that the preprocessing might not have been completed properly.
For context, I have already completed running fmriprep with 2mm(res-2) on this dataset with no problem and no such error messages.
When inspecting the subject html files, they point to missing files for 3mm (eg. t1w, t2w, brain_mask, etc…) from the MNI152NLin2009cAsym template I am using.
I’m not sure whether to use some kind of custom template file for the missing res-3 files or just switch to MNI152NLin6Asym in my preprocessing.
Any help would be appreciated!
Attached below are notes relevant to the failures in processing.
Have a good day,
#!/bin/bash
module load singularity
FMRIPREP=/bucket/KuhnU/Soheil/Psychiatry/fmriprepImages/fmriprep_23.1.4.sif
SURF_LICENSE=/bucket/KuhnU/Seann/license/license.txt
BIDS_DIR=/bucket/KuhnU/Soheil/Psychiatry/SRPBS_bids/BIDS
OUTPUT_DIR=/flash/KuhnU/Seann/SRPBS/fmriprep
WORK_DIR=/flash/KuhnU/Seann/SRPBS
# Create a list of all sub- directories
SUB_LIST=($(ls $BIDS_DIR | grep '^sub-'))
# Optionally log the list to see what's being processed
echo "Processing the following subjects:"
printf "%s\n" "${SUB_LIST[@]}"
SUBJ=${SUB_LIST [$1]} # retrieves the subject based on the input argument index
echo "Current subject: $SUBJ"
singularity run --cleanenv \
$FMRIPREP \
$BIDS_DIR $OUTPUT_DIR participant \
--n_cpus $SLURM_CPUS_PER_TASK \
--omp-nthreads $SLURM_CPUS_PER_TASK \
--fs-license-file=$SURF_LICENSE \
--participant-label=$SUBJ \
--skip_bids_validation \
--dummy-scans 12 \
--output-spaces anat fsnative MNI152NLin2009cAsym: res-3 fsaverage:den-10k fsLR \
--cifti-output \
-W $WORK_DIR
echo "Completed processing for subject: $SUBJ"
23.1.4
Singularity
PASTE VALIDATOR OUTPUT HERE
PASTE LOG OUTPUT HERE
Subject Func Folder after Res-3 preprocessing was “finished”
Same Res-3 Subject’s errors in html file stating missing t1w_file
Same Res-3 Subject’s Output.txt showing fmriprep start, errors in selecting template, and final “fmriprep finished successfully but preprocessing unsuccessful” message
Steven
September 5, 2024, 12:03pm
2
Hi @Seann_Wang and welcome to neurostars!
In the future, please use the Software Support post category for questions like these, which prompts you for important information and helps organize your post (for example, code in text instead of screenshots). You can see I reformatted your post for you this time. You can see that you did not provide the BIDS validation report or the error traceback, which are typically helpful in debugging issues.
Templateflow does not have a res-3 T1w image. You would have to switch to a different resolution, or resample a T1 and place it in your templateflow cache. See below for the files regularly in the MNI152NLin2009cAsym templateflow folder.
├── CHANGES
├── LICENSE
├── scripts
│ └── softbrainmask.py
├── template_description.json
├── tpl-MNI152NLin2009cAsym_atlas-DiFuMo_desc-1024dimensions_probseg.tsv
├── tpl-MNI152NLin2009cAsym_atlas-DiFuMo_desc-128dimensions_probseg.tsv
├── tpl-MNI152NLin2009cAsym_atlas-DiFuMo_desc-256dimensions_probseg.tsv
├── tpl-MNI152NLin2009cAsym_atlas-DiFuMo_desc-512dimensions_probseg.tsv
├── tpl-MNI152NLin2009cAsym_atlas-DiFuMo_desc-64dimensions_probseg.tsv
├── tpl-MNI152NLin2009cAsym_atlas-MIAL67ThalamicNuclei_dseg.json
├── tpl-MNI152NLin2009cAsym_atlas-MIAL67ThalamicNuclei_dseg.tsv
├── tpl-MNI152NLin2009cAsym_atlas-Schaefer2018_desc-1000Parcels17Networks_dseg.tsv
├── tpl-MNI152NLin2009cAsym_atlas-Schaefer2018_desc-1000Parcels7Networks_dseg.tsv
├── tpl-MNI152NLin2009cAsym_atlas-Schaefer2018_desc-100Parcels17Networks_dseg.tsv
├── tpl-MNI152NLin2009cAsym_atlas-Schaefer2018_desc-100Parcels7Networks_dseg.tsv
├── tpl-MNI152NLin2009cAsym_atlas-Schaefer2018_desc-200Parcels17Networks_dseg.tsv
├── tpl-MNI152NLin2009cAsym_atlas-Schaefer2018_desc-200Parcels7Networks_dseg.tsv
├── tpl-MNI152NLin2009cAsym_atlas-Schaefer2018_desc-300Parcels17Networks_dseg.tsv
├── tpl-MNI152NLin2009cAsym_atlas-Schaefer2018_desc-300Parcels7Networks_dseg.tsv
├── tpl-MNI152NLin2009cAsym_atlas-Schaefer2018_desc-400Parcels17Networks_dseg.tsv
├── tpl-MNI152NLin2009cAsym_atlas-Schaefer2018_desc-400Parcels7Networks_dseg.tsv
├── tpl-MNI152NLin2009cAsym_atlas-Schaefer2018_desc-500Parcels17Networks_dseg.tsv
├── tpl-MNI152NLin2009cAsym_atlas-Schaefer2018_desc-500Parcels7Networks_dseg.tsv
├── tpl-MNI152NLin2009cAsym_atlas-Schaefer2018_desc-600Parcels17Networks_dseg.tsv
├── tpl-MNI152NLin2009cAsym_atlas-Schaefer2018_desc-600Parcels7Networks_dseg.tsv
├── tpl-MNI152NLin2009cAsym_atlas-Schaefer2018_desc-800Parcels17Networks_dseg.tsv
├── tpl-MNI152NLin2009cAsym_atlas-Schaefer2018_desc-800Parcels7Networks_dseg.tsv
├── tpl-MNI152NLin2009cAsym_desc-carpet_dseg.tsv
├── tpl-MNI152NLin2009cAsym_from-MNI152NLin6Asym_mode-image_xfm.h5 -> .git/annex/objects/Kw/F5/MD5E-s204735104--1f9b29f2d5cb898cc97243fe92ee9304.h5/MD5E-s204735104--1f9b29f2d5cb898cc97243fe92ee9304.h5
├── tpl-MNI152NLin2009cAsym_from-OASISTRT20_mode-image_xfm.mat
├── tpl-MNI152NLin2009cAsym_res-01_PD.nii.gz -> .git/annex/objects/4Z/ZZ/MD5E-s13296895--58f9f54f6e05632ce28747ae64affdbd.nii.gz/MD5E-s13296895--58f9f54f6e05632ce28747ae64affdbd.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_T1w.nii.gz -> .git/annex/objects/7k/xF/MD5E-s13685075--6c64ebf985fe30d93e49a4baa41b9278.nii.gz/MD5E-s13685075--6c64ebf985fe30d93e49a4baa41b9278.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_T2w.nii.gz -> .git/annex/objects/WG/68/MD5E-s13286303--e61069d8921aeb5326187e98caaf8dff.nii.gz/MD5E-s13286303--e61069d8921aeb5326187e98caaf8dff.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-HOCPAL_desc-th0_dseg.nii.gz -> .git/annex/objects/kW/Mx/MD5E-s326295--182dffcad0d0254316318caba1822f33.nii.gz/MD5E-s326295--182dffcad0d0254316318caba1822f33.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-HOCPAL_desc-th25_dseg.nii.gz -> .git/annex/objects/Q5/zp/MD5E-s279888--6ed720d8befb7f910b49773e1f4ab8d1.nii.gz/MD5E-s279888--6ed720d8befb7f910b49773e1f4ab8d1.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-HOCPAL_desc-th50_dseg.nii.gz -> .git/annex/objects/g0/M8/MD5E-s221534--832c098d969bf54c8269ed6fc323ec8b.nii.gz/MD5E-s221534--832c098d969bf54c8269ed6fc323ec8b.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-HOCPA_desc-th0_dseg.nii.gz -> .git/annex/objects/J6/x9/MD5E-s316444--a23382c8ee57cf8b9871be3f36cf1afb.nii.gz/MD5E-s316444--a23382c8ee57cf8b9871be3f36cf1afb.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-HOCPA_desc-th25_dseg.nii.gz -> .git/annex/objects/FQ/jZ/MD5E-s278168--5366d6b3bff40ae3740f5153ecf6f347.nii.gz/MD5E-s278168--5366d6b3bff40ae3740f5153ecf6f347.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-HOCPA_desc-th50_dseg.nii.gz -> .git/annex/objects/4M/ZX/MD5E-s223529--f908844a4ea1db3959359c79c54230a3.nii.gz/MD5E-s223529--f908844a4ea1db3959359c79c54230a3.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-HOSPA_desc-th0_dseg.nii.gz -> .git/annex/objects/x3/qZ/MD5E-s301870--e23729abb18cdf78f1d8f40bfd963a82.nii.gz/MD5E-s301870--e23729abb18cdf78f1d8f40bfd963a82.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-HOSPA_desc-th25_dseg.nii.gz -> .git/annex/objects/Mv/Q4/MD5E-s276673--511b471b6c99b164f00c5f0fd621e636.nii.gz/MD5E-s276673--511b471b6c99b164f00c5f0fd621e636.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-HOSPA_desc-th50_dseg.nii.gz -> .git/annex/objects/9w/gq/MD5E-s272990--d8074c2329d56d904a3d482ac8cb2e79.nii.gz/MD5E-s272990--d8074c2329d56d904a3d482ac8cb2e79.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-MIAL67ThalamicNuclei_dseg.nii.gz -> .git/annex/objects/kZ/wj/MD5E-s45949--5eaed0b67a4c28758240e525690ad498.nii.gz/MD5E-s45949--5eaed0b67a4c28758240e525690ad498.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-MIAL67ThalamicNuclei_probseg.nii.gz -> .git/annex/objects/jJ/QK/MD5E-s2254986--c3aae1a4f3b14940e8666f02babc8a63.nii.gz/MD5E-s2254986--c3aae1a4f3b14940e8666f02babc8a63.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-Schaefer2018_desc-1000Parcels17Networks_dseg.nii.gz -> .git/annex/objects/gG/7M/MD5E-s542676--0c8f9b8f9670fe74b780300773881a50.nii.gz/MD5E-s542676--0c8f9b8f9670fe74b780300773881a50.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-Schaefer2018_desc-1000Parcels7Networks_dseg.nii.gz -> .git/annex/objects/gG/36/MD5E-s542359--2af598249517529faac7e294498344f9.nii.gz/MD5E-s542359--2af598249517529faac7e294498344f9.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-Schaefer2018_desc-100Parcels17Networks_dseg.nii.gz -> .git/annex/objects/p6/K6/MD5E-s414922--96dcfa35ded4cd052950d29785a380a6.nii.gz/MD5E-s414922--96dcfa35ded4cd052950d29785a380a6.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-Schaefer2018_desc-100Parcels7Networks_dseg.nii.gz -> .git/annex/objects/mz/7z/MD5E-s415157--91732aae8643bfa7c05515c92156f7d7.nii.gz/MD5E-s415157--91732aae8643bfa7c05515c92156f7d7.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-Schaefer2018_desc-200Parcels17Networks_dseg.nii.gz -> .git/annex/objects/4M/fq/MD5E-s440875--b205787deae1f642280d2fb7430e1207.nii.gz/MD5E-s440875--b205787deae1f642280d2fb7430e1207.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-Schaefer2018_desc-200Parcels7Networks_dseg.nii.gz -> .git/annex/objects/QJ/Mk/MD5E-s440870--f58c39f48ed0caefb5a1794fb76dc8f4.nii.gz/MD5E-s440870--f58c39f48ed0caefb5a1794fb76dc8f4.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-Schaefer2018_desc-300Parcels17Networks_dseg.nii.gz -> .git/annex/objects/0Z/FX/MD5E-s460915--61b5bec1f4432e63039a455a6d5c135f.nii.gz/MD5E-s460915--61b5bec1f4432e63039a455a6d5c135f.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-Schaefer2018_desc-300Parcels7Networks_dseg.nii.gz -> .git/annex/objects/gk/gj/MD5E-s461123--0f020751caf21f054cb8e1e4a81518d6.nii.gz/MD5E-s461123--0f020751caf21f054cb8e1e4a81518d6.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-Schaefer2018_desc-400Parcels17Networks_dseg.nii.gz -> .git/annex/objects/4V/8J/MD5E-s479472--7eb50119fa9ef3b09b592a552745848a.nii.gz/MD5E-s479472--7eb50119fa9ef3b09b592a552745848a.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-Schaefer2018_desc-400Parcels7Networks_dseg.nii.gz -> .git/annex/objects/q5/Xm/MD5E-s479435--5b3c081760b2e464d8dbf7696af73185.nii.gz/MD5E-s479435--5b3c081760b2e464d8dbf7696af73185.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-Schaefer2018_desc-500Parcels17Networks_dseg.nii.gz -> .git/annex/objects/mM/ZJ/MD5E-s492330--93b1fa571ebee60e1c7a94bd71ceaa77.nii.gz/MD5E-s492330--93b1fa571ebee60e1c7a94bd71ceaa77.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-Schaefer2018_desc-500Parcels7Networks_dseg.nii.gz -> .git/annex/objects/f8/v5/MD5E-s491872--00a818640ad1d33b9f2defbee3e78a14.nii.gz/MD5E-s491872--00a818640ad1d33b9f2defbee3e78a14.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-Schaefer2018_desc-600Parcels17Networks_dseg.nii.gz -> .git/annex/objects/7p/J4/MD5E-s504414--4f2c45d5ae36c9a0b3a5336bd07cb04d.nii.gz/MD5E-s504414--4f2c45d5ae36c9a0b3a5336bd07cb04d.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-Schaefer2018_desc-600Parcels7Networks_dseg.nii.gz -> .git/annex/objects/p0/VG/MD5E-s503597--6b28d2128808ebf8e77ad596f4cfc9f4.nii.gz/MD5E-s503597--6b28d2128808ebf8e77ad596f4cfc9f4.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-Schaefer2018_desc-800Parcels17Networks_dseg.nii.gz -> .git/annex/objects/X8/V9/MD5E-s525069--68fb2c32ae59242cd241ae2fe677ddd7.nii.gz/MD5E-s525069--68fb2c32ae59242cd241ae2fe677ddd7.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_atlas-Schaefer2018_desc-800Parcels7Networks_dseg.nii.gz -> .git/annex/objects/W8/3w/MD5E-s525129--fef730aea115da4e83235afbb8264b70.nii.gz/MD5E-s525129--fef730aea115da4e83235afbb8264b70.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_desc-BrainCerebellumExtraction_mask.nii.gz -> .git/annex/objects/jj/K4/MD5E-s156957--52dce7c1572b5fff51123ba1937dbba3.nii.gz/MD5E-s156957--52dce7c1572b5fff51123ba1937dbba3.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_desc-BrainCerebellumRegistration_mask.nii.gz -> .git/annex/objects/mg/1q/MD5E-s149324--ca9b07e5d3d47a49e502980d02f2faec.nii.gz/MD5E-s149324--ca9b07e5d3d47a49e502980d02f2faec.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_desc-brain_T1w.nii.gz -> .git/annex/objects/5J/VJ/MD5E-s3472309--ed4c3780e65f38ed87ffd85da3acb46c.nii.gz/MD5E-s3472309--ed4c3780e65f38ed87ffd85da3acb46c.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_desc-brain_mask.nii.gz -> .git/annex/objects/2z/xF/MD5E-s159538--dc727a2781ca720df0385f9501ace07d.nii.gz/MD5E-s159538--dc727a2781ca720df0385f9501ace07d.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_desc-brain_probseg.nii.gz -> .git/annex/objects/2J/2G/MD5E-s3926061--4e45306d37914e8cd24a9de931db6f22.nii.gz/MD5E-s3926061--4e45306d37914e8cd24a9de931db6f22.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_desc-carpet_dseg.nii.gz -> .git/annex/objects/1w/9j/MD5E-s451304--8b726a5a4b0580be17a670a7570cc2a3.nii.gz/MD5E-s451304--8b726a5a4b0580be17a670a7570cc2a3.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_desc-eye_mask.nii.gz -> .git/annex/objects/fK/mQ/MD5E-s62992--32d50f213f601d7452b60f7869bcf447.nii.gz/MD5E-s62992--32d50f213f601d7452b60f7869bcf447.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_desc-face_mask.nii.gz -> .git/annex/objects/xQ/3f/MD5E-s58000--6aac67c0f53f29423459eb6f15e31a7f.nii.gz/MD5E-s58000--6aac67c0f53f29423459eb6f15e31a7f.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_desc-head_mask.nii.gz -> .git/annex/objects/KG/JK/MD5E-s975697--d43524baa07d215b8f10a97a5ca45359.nii.gz/MD5E-s975697--d43524baa07d215b8f10a97a5ca45359.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_label-CSF_probseg.nii.gz -> .git/annex/objects/G6/Fx/MD5E-s5494321--455e31910a541913a4fd26ac334e0673.nii.gz/MD5E-s5494321--455e31910a541913a4fd26ac334e0673.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_label-GM_probseg.nii.gz -> .git/annex/objects/z5/k6/MD5E-s7566494--66e5d662e1dbafc52099b4aadc608454.nii.gz/MD5E-s7566494--66e5d662e1dbafc52099b4aadc608454.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_label-WM_probseg.nii.gz -> .git/annex/objects/MJ/zk/MD5E-s6911720--674a64b55dac300f348d5e2602ade05d.nii.gz/MD5E-s6911720--674a64b55dac300f348d5e2602ade05d.nii.gz
├── tpl-MNI152NLin2009cAsym_res-01_label-brain_probseg.nii.gz -> .git/annex/objects/2J/2G/MD5E-s3926061--4e45306d37914e8cd24a9de931db6f22.nii.gz/MD5E-s3926061--4e45306d37914e8cd24a9de931db6f22.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_PD.nii.gz -> .git/annex/objects/10/WJ/MD5E-s1723911--fd225d67e641b2795a2fa3d50f1f0eaa.nii.gz/MD5E-s1723911--fd225d67e641b2795a2fa3d50f1f0eaa.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_T1w.nii.gz -> .git/annex/objects/x6/65/MD5E-s1763084--04e6e6eae189c060ba17478e097c6a24.nii.gz/MD5E-s1763084--04e6e6eae189c060ba17478e097c6a24.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_T2w.nii.gz -> .git/annex/objects/9g/3g/MD5E-s1717372--cb376b6e9dc182d4ba024e043cf4bd24.nii.gz/MD5E-s1717372--cb376b6e9dc182d4ba024e043cf4bd24.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-DiFuMo_desc-1024dimensions_probseg.nii.gz -> .git/annex/objects/17/94/MD5E-s27344598--099a7be0740a9362e8e33a882f66d32f.nii.gz/MD5E-s27344598--099a7be0740a9362e8e33a882f66d32f.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-DiFuMo_desc-128dimensions_probseg.nii.gz -> .git/annex/objects/w5/KJ/MD5E-s4115835--18adff3747a4d032a9666139f4e3bfd2.nii.gz/MD5E-s4115835--18adff3747a4d032a9666139f4e3bfd2.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-DiFuMo_desc-256dimensions_probseg.nii.gz -> .git/annex/objects/w3/28/MD5E-s7715436--7ac81a8be0a75b9b497a32edca4ff397.nii.gz/MD5E-s7715436--7ac81a8be0a75b9b497a32edca4ff397.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-DiFuMo_desc-512dimensions_probseg.nii.gz -> .git/annex/objects/k2/kG/MD5E-s14359345--8dce2e0875bd6779e1399b5969283366.nii.gz/MD5E-s14359345--8dce2e0875bd6779e1399b5969283366.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-DiFuMo_desc-64dimensions_probseg.nii.gz -> .git/annex/objects/Px/Zg/MD5E-s2247088--fc55f0cc33cc34be6cc91b1159e1c97d.nii.gz/MD5E-s2247088--fc55f0cc33cc34be6cc91b1159e1c97d.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-HOCPAL_desc-th0_dseg.nii.gz -> .git/annex/objects/WM/VG/MD5E-s64292--8c81970fee4aa0dfc7fbfbc0f9b5d2d3.nii.gz/MD5E-s64292--8c81970fee4aa0dfc7fbfbc0f9b5d2d3.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-HOCPAL_desc-th25_dseg.nii.gz -> .git/annex/objects/qw/94/MD5E-s54982--3c9e9b0dc3006ba149bcd721000a3c3e.nii.gz/MD5E-s54982--3c9e9b0dc3006ba149bcd721000a3c3e.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-HOCPAL_desc-th50_dseg.nii.gz -> .git/annex/objects/Kz/MV/MD5E-s42971--c6168b3d7a09b16ac2ef05b51bbb7679.nii.gz/MD5E-s42971--c6168b3d7a09b16ac2ef05b51bbb7679.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-HOCPA_desc-th0_dseg.nii.gz -> .git/annex/objects/46/Jq/MD5E-s62209--523f3866ece36cff477f08a8b9a0708a.nii.gz/MD5E-s62209--523f3866ece36cff477f08a8b9a0708a.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-HOCPA_desc-th25_dseg.nii.gz -> .git/annex/objects/xz/6F/MD5E-s53430--a27d9b02eda4901803d7080241275f44.nii.gz/MD5E-s53430--a27d9b02eda4901803d7080241275f44.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-HOCPA_desc-th50_dseg.nii.gz -> .git/annex/objects/Z2/fp/MD5E-s42615--26e64ef7cccac961ad76f93878a7e20b.nii.gz/MD5E-s42615--26e64ef7cccac961ad76f93878a7e20b.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-HOSPA_desc-th0_dseg.nii.gz -> .git/annex/objects/PV/Q7/MD5E-s55917--593cdb684ed4d609c5a70638b3677437.nii.gz/MD5E-s55917--593cdb684ed4d609c5a70638b3677437.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-HOSPA_desc-th25_dseg.nii.gz -> .git/annex/objects/QJ/wZ/MD5E-s52039--5929dc8feee4d1bfc5a1d32468e85861.nii.gz/MD5E-s52039--5929dc8feee4d1bfc5a1d32468e85861.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-HOSPA_desc-th50_dseg.nii.gz -> .git/annex/objects/qw/WM/MD5E-s51029--8540fc98056203edd0426599e8f7ea5a.nii.gz/MD5E-s51029--8540fc98056203edd0426599e8f7ea5a.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-HOSPA_probseg.nii.gz -> .git/annex/objects/KW/fw/MD5E-s4917--3733f382afbabb1475e750bda31f7a74.nii.gz/MD5E-s4917--3733f382afbabb1475e750bda31f7a74.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-Schaefer2018_desc-1000Parcels17Networks_dseg.nii.gz -> .git/annex/objects/6W/5M/MD5E-s104763--98c946aa01ab6840feab2da1f9862a6c.nii.gz/MD5E-s104763--98c946aa01ab6840feab2da1f9862a6c.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-Schaefer2018_desc-1000Parcels7Networks_dseg.nii.gz -> .git/annex/objects/mM/70/MD5E-s105175--11dd3a363d1657967e125448837aac16.nii.gz/MD5E-s105175--11dd3a363d1657967e125448837aac16.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-Schaefer2018_desc-100Parcels17Networks_dseg.nii.gz -> .git/annex/objects/Qq/GX/MD5E-s77794--0d3afecb8a4e0f0f8eac7b2a3e824266.nii.gz/MD5E-s77794--0d3afecb8a4e0f0f8eac7b2a3e824266.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-Schaefer2018_desc-100Parcels7Networks_dseg.nii.gz -> .git/annex/objects/w6/w4/MD5E-s77904--4eaf4c144a8ccae1b9000c4368d977bd.nii.gz/MD5E-s77904--4eaf4c144a8ccae1b9000c4368d977bd.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-Schaefer2018_desc-200Parcels17Networks_dseg.nii.gz -> .git/annex/objects/fJ/q5/MD5E-s83246--3908d659eb62550aece0c95b3f2ae882.nii.gz/MD5E-s83246--3908d659eb62550aece0c95b3f2ae882.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-Schaefer2018_desc-200Parcels7Networks_dseg.nii.gz -> .git/annex/objects/kG/Pf/MD5E-s83145--0135c7503f2745ea647d9cd114246ced.nii.gz/MD5E-s83145--0135c7503f2745ea647d9cd114246ced.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-Schaefer2018_desc-300Parcels17Networks_dseg.nii.gz -> .git/annex/objects/P2/1W/MD5E-s88007--937ab5a275df8cbad70582e42c796567.nii.gz/MD5E-s88007--937ab5a275df8cbad70582e42c796567.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-Schaefer2018_desc-300Parcels7Networks_dseg.nii.gz -> .git/annex/objects/pQ/ZP/MD5E-s87639--ee972a4572b49e2f802aca415ee976b6.nii.gz/MD5E-s87639--ee972a4572b49e2f802aca415ee976b6.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-Schaefer2018_desc-400Parcels17Networks_dseg.nii.gz -> .git/annex/objects/Kp/vq/MD5E-s91723--78bae9f87e3adf05dea9751471048280.nii.gz/MD5E-s91723--78bae9f87e3adf05dea9751471048280.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-Schaefer2018_desc-400Parcels7Networks_dseg.nii.gz -> .git/annex/objects/wx/2Q/MD5E-s91904--c6d141b06b9ce0627eb197aa4657cfe0.nii.gz/MD5E-s91904--c6d141b06b9ce0627eb197aa4657cfe0.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-Schaefer2018_desc-500Parcels17Networks_dseg.nii.gz -> .git/annex/objects/Q6/jG/MD5E-s94385--cea36dc22ee0929fb0fabf55a1b426e9.nii.gz/MD5E-s94385--cea36dc22ee0929fb0fabf55a1b426e9.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-Schaefer2018_desc-500Parcels7Networks_dseg.nii.gz -> .git/annex/objects/q2/kX/MD5E-s94388--17f6f8f38b2d2e94d035993bfc7f3d63.nii.gz/MD5E-s94388--17f6f8f38b2d2e94d035993bfc7f3d63.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-Schaefer2018_desc-600Parcels17Networks_dseg.nii.gz -> .git/annex/objects/j4/KG/MD5E-s96884--cbdf82c562ca2dba558caf115a5c8c9e.nii.gz/MD5E-s96884--cbdf82c562ca2dba558caf115a5c8c9e.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-Schaefer2018_desc-600Parcels7Networks_dseg.nii.gz -> .git/annex/objects/JX/5P/MD5E-s96830--c79749d0e374bd56d7bc0fe0acfaeec5.nii.gz/MD5E-s96830--c79749d0e374bd56d7bc0fe0acfaeec5.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-Schaefer2018_desc-800Parcels17Networks_dseg.nii.gz -> .git/annex/objects/gV/1X/MD5E-s100864--588a7fb2894fa20d270ea381e8e8d4f2.nii.gz/MD5E-s100864--588a7fb2894fa20d270ea381e8e8d4f2.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_atlas-Schaefer2018_desc-800Parcels7Networks_dseg.nii.gz -> .git/annex/objects/WQ/Pp/MD5E-s101116--232f5a7be68ae2d9a4a4472bd7dbfe2f.nii.gz/MD5E-s101116--232f5a7be68ae2d9a4a4472bd7dbfe2f.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_desc-DKT31_dseg.nii.gz -> .git/annex/objects/27/0k/MD5E-s91359--cdbfbfff34910f32774c84cb396c0e5e.nii.gz/MD5E-s91359--cdbfbfff34910f32774c84cb396c0e5e.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_desc-brain_T1w.nii.gz -> .git/annex/objects/03/pW/MD5E-s451810--97adb4a6fc71850495e11d832a5e4e90.nii.gz/MD5E-s451810--97adb4a6fc71850495e11d832a5e4e90.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz -> .git/annex/objects/4p/q3/MD5E-s29576--5c1bbc73a04d9dd5b84330d712ffd760.nii.gz/MD5E-s29576--5c1bbc73a04d9dd5b84330d712ffd760.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_desc-carpet_dseg.nii.gz -> .git/annex/objects/J6/xJ/MD5E-s86858--a425a6335e9540f5ca0221cd4a5ff37b.nii.gz/MD5E-s86858--a425a6335e9540f5ca0221cd4a5ff37b.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_desc-eye_mask.nii.gz -> .git/annex/objects/vF/qp/MD5E-s10399--961bf9900f37b78d2621e51900d05601.nii.gz/MD5E-s10399--961bf9900f37b78d2621e51900d05601.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz -> .git/annex/objects/j3/GP/MD5E-s1751209--e401c5b0311864c4c2f3625c9617374f.nii.gz/MD5E-s1751209--e401c5b0311864c4c2f3625c9617374f.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_desc-face_mask.nii.gz -> .git/annex/objects/Kq/p1/MD5E-s8451--187db76c6aa21fb6685ed6083d1ea130.nii.gz/MD5E-s8451--187db76c6aa21fb6685ed6083d1ea130.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_desc-head_mask.nii.gz -> .git/annex/objects/F4/PX/MD5E-s135245--3c5d986f1fd4faebf646698a8d223c50.nii.gz/MD5E-s135245--3c5d986f1fd4faebf646698a8d223c50.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_label-CSF_probseg.nii.gz -> .git/annex/objects/5f/Pw/MD5E-s886518--7a36780a3efdb8f73fcb3c96ee101f9c.nii.gz/MD5E-s886518--7a36780a3efdb8f73fcb3c96ee101f9c.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_label-GM_probseg.nii.gz -> .git/annex/objects/06/qG/MD5E-s1044456--9e38c9dbb352625abc89e23449114705.nii.gz/MD5E-s1044456--9e38c9dbb352625abc89e23449114705.nii.gz
├── tpl-MNI152NLin2009cAsym_res-02_label-WM_probseg.nii.gz -> .git/annex/objects/Wm/pJ/MD5E-s993575--c4124028b3829bd059722b7aa02c02d2.nii.gz/MD5E-s993575--c4124028b3829bd059722b7aa02c02d2.nii.gz
├── tpl-MNI152NLin2009cAsym_res-03_atlas-DiFuMo_desc-1024dimensions_probseg.nii.gz -> .git/annex/objects/2j/X6/MD5E-s24948809--10a5658877a5d9d9cecf507d44750414.nii.gz/MD5E-s24948809--10a5658877a5d9d9cecf507d44750414.nii.gz
├── tpl-MNI152NLin2009cAsym_res-03_atlas-DiFuMo_desc-128dimensions_probseg.nii.gz -> .git/annex/objects/87/kx/MD5E-s3336160--c537cc4ccd57c5df8a0dd7c86d49f5b0.nii.gz/MD5E-s3336160--c537cc4ccd57c5df8a0dd7c86d49f5b0.nii.gz
├── tpl-MNI152NLin2009cAsym_res-03_atlas-DiFuMo_desc-256dimensions_probseg.nii.gz -> .git/annex/objects/fJ/8M/MD5E-s6512295--4e9868ff2ad8177bf85099108b74afaa.nii.gz/MD5E-s6512295--4e9868ff2ad8177bf85099108b74afaa.nii.gz
├── tpl-MNI152NLin2009cAsym_res-03_atlas-DiFuMo_desc-512dimensions_probseg.nii.gz -> .git/annex/objects/VP/fq/MD5E-s12690218--7516e74647b0c7af92084cbc59539706.nii.gz/MD5E-s12690218--7516e74647b0c7af92084cbc59539706.nii.gz
└── tpl-MNI152NLin2009cAsym_res-03_atlas-DiFuMo_desc-64dimensions_probseg.nii.gz -> .git/annex/objects/MV/3X/MD5E-s1726795--45eadbe035619edbf0541cff7ac67c29.nii.gz/MD5E-s1726795--45eadbe035619edbf0541cff7ac67c29.nii.gz
Best,