Hi @Guillaumeth,
Previously I tried building the singularity imaging myself. I have just downloaded and used the easy install method, but still recieve the same error.
The image I am currently using is: tractoflow_2.1.1_650f776_2020-07-15.img
Did you manage to make Tractoflow work ?
If so, can you reply with your fix and finally can you mark this thread as solved ? It helps sort the different issues.
Hi @abore ,
The acquistion protocol of my data produced the following b-values:
“0 50 350 600 900 1150 100 400 650 950 150 450 700 1000 1300 200 500 800 1050 1350 300 850 1100 1400”.
Since this is not shelled, FSLs Eddy cannot preprocess it. For this reason we moved to QSIPrep as it supports 3DShore motion correction.
Forgive any mistakes or misunderstandings of the capability of tractoflow, I am a ML researcher not a computational neuroscientist!