Summary of what happened:
I am running this implementation of pymvpa and running into an error where the conditions flag is not being picked up
Command used (and if a helper script was used, a link to the helper script or the command generated):
singularity run -B /n ~/pymvpa.sif $bidsdir $outdir participant_test -p Redup001 -s 01 -t REDUP -c aab abb abc
Version:
4.0.4
Environment (Docker, Singularity / Apptainer, custom installation):
Singularity
Data formatted according to a validatable standard? Please provide the output of the validator:
PASTE VALIDATOR OUTPUT HERE
Relevant log outputs (up to 20 lines):
File "/code/run.py", line 674, in <module>
'_pattern-' + '-'.join(args.conditions_to_classify) + '.nii.gz'))
TypeError: cannot concatenate 'str' and 'NoneType' objects
Screenshots / relevant information:
This is the argument code in run.py, and for some reason the conditions flag is not being read in. I’ve tried the alternate longer flag, as well as rearranging the order of the flag in different positions to no avail. Any help on getting this running would be greatly appreciated — thanks!