Summary of what happened:
I’m attempting to convert my data into BIDS format using dcm2bids, but I encountered the following error. I am unsure about its meaning and whether not addressing it will critically impact my analysis.
Warning: Issue870: Slice timing range of first volume: range 0..1920, TA= 1920, TR=2000 ms)
Warning: Issue870: Slice timing range of 2nd volume: range 0..1922.5, TA= 1922.5, TR=2000 ms)
Command used (and if a helper script was used, a link to the helper script or the command generated):
dcm2bids_scaffold -o /mnt/d/f4
Version:
dcm2bids version: 3.2.0dcm2niiX version v1.0.20241211
Environment (Docker, Singularity / Apptainer, custom installation):
dcm2bids: ubuntu - condaData formatted according to a validatable standard? Please provide the output of the validator:
validatedRelevant log outputs (up to 20 lines):
WARNING | Chris Rorden's dcm2niiX version v1.0.20241211 GCC13.3.0 x86-64 (64-bit Linux)
Found 602 DICOM file(s)
Convert 26 DICOM as /mnt/d/f4/tmp_dcm2bids/sub-y074_ses-2/074_MMY_field_map_20151216140821_28_e2_ph (64x64x26x1)
Convert 224 DICOM as /mnt/d/f4/tmp_dcm2bids/sub-y074_ses-2/074_MMY_t1_mpr_sag_p2_1mm_WholeBrain_20151216140821_29 (256x256x224x1)
Slices not stacked: echo varies (TE 4.92, 7.38; echo 1, 2). Use 'merge 2D slices' option to force stacking
Convert 26 DICOM as /mnt/d/f4/tmp_dcm2bids/sub-y074_ses-2/074_MMY_field_map_20151216140821_27_e1 (64x64x26x1)
Convert 26 DICOM as /mnt/d/f4/tmp_dcm2bids/sub-y074_ses-2/074_MMY_field_map_20151216140821_27_e2 (64x64x26x1)
Warning: Issue870: Slice timing range of first volume: range 0..1920, TA= 1920, TR=2000 ms)
Warning: Issue870: Slice timing range of 2nd volume: range 0..1922.5, TA= 1922.5, TR=2000 ms)
Convert 150 DICOM as /mnt/d/f4/tmp_dcm2bids/sub-y074_ses-2/074_MMY_ep2d_FOV240_3x3x3_30sl_TR2000_TE30_bw1096Hz_whole_brain_20151216140821_17 (80x80x30x150)
Convert 150 DICOM as /mnt/d/f4/tmp_dcm2bids/sub-y074_ses-2/074_MMY_ep2d_FOV240_3x3x3_30sl_TR2000_TE30_bw1096Hz_whole_brain_20151216140821_22 (80x80x30x150)
Conversion required 15.034612 seconds (0.578835 for core code).