Hello everyone,
We are trying to use the latest version of xcp_d (v0.3.2) after preprocessing my data with fMRIPrep. However, I’m stuck on a persmission error that I cannot figure out.
Command used:
singularity run --cleanenv \
-B $fprep_dir:/data:ro \
-B $xcp_dir:/out \
-B $temp_dir:/work \
$SINGMAGE /data /out \
participant --participant-label ${subi} \
-p 36P -w /work
Version:
xcp_d v0.3.2
Environment:
Singularity
Relevant log outputs (up to 20 lines):
Matplotlib created a temporary config/cache directory at /tmp/matplotlib-8n6ux0j6 because the default path (/home/xcp_d/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
Traceback (most recent call last):
File "/usr/local/miniconda/bin/xcp_d", line 8, in <module>
sys.exit(main())
...
File "/usr/local/miniconda/lib/python3.8/site-packages/pkg_resources/__init__.py", line 1890, in get_metadata
with io.open(self.path, encoding='utf-8', errors="replace") as f:
PermissionError: [Errno 13] Permission denied: '/usr/local/miniconda/lib/python3.8/site-packages/.wh.pip-20.2.4-py3.8.egg-info'
Screenshots / relevant information:
A screen shot of the entire error message
Thank you for your help.
Kind regards
Steven