Can someone describe the following files and their differences in fMRI data?
bold_mcf_brain_mask.nii.gz
bold_mcf_brain.nii.gz
bold_mcf.nii.gz
bold.nii.gz
For example, these files are here:
BOLD files
Can someone describe the following files and their differences in fMRI data?
bold_mcf_brain_mask.nii.gz
bold_mcf_brain.nii.gz
bold_mcf.nii.gz
bold.nii.gz
For example, these files are here:
BOLD files
I am not an expert on the old OpenFMRI derivatives scheme, so I invite correction, but here’s how I would read these:
bold.nii.gz
- Original BOLD seriesbold_mcf.nii.gz
- Motion-corrected BOLD seriesbold_mcf_brain.nii.gz
- Motion-corrected, skull-stripped BOLD seriesbold_mcf_brain_mask.nii.gz
- Binary volume of voxels in/out of the brain, in BOLD space.I would expect that bold_mcf_brain.nii.gz
is exactly bold_mcf.nii.gz
, masked by bold_mcf_brain_mask.nii.gz
.
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