I did HCP pipeline preprocessing for same data running on 2 computers:
a computer with LINUX CentOS6 64bit
a computer with LINUX CentOS7 64bit
I processed a subject on both systems, and checking the results.
I noticed that the results were visibly different.
From my less experience, I think that the difference probably come from recon-all step.
What could be the reason for this failure at reproducibility?
Note that I changed the program slightly so as not to use the T2 image.
Thank you so much,