Hello! I’m trying to perform GLM on the parcel level (my data is already preprocessed and averaged across voxels). I’ve found the run_glm function from nilearn, but I don’t understand how to interpret my output and how I can get betas from this ![]()
Thank you very much for your time
labels, results = run_glm(data_for_glm, design_matrix)
labels
array(['0.73', '0.51', '0.46', '0.67', '0.76', '0.74', '0.47', '0.41',
'0.45', '0.55', '0.52', '0.53', '0.7', '0.28', '0.66', '0.45',
'0.71', '0.45', '0.66', '0.58', '0.62', '0.5', '0.59', '0.05',
'0.62', '0.53', '0.41', '0.47', '0.51', '0.33', '0.49', '0.25',
'0.4', '0.2', '0.24', '0.02', '0.25', '0.18', '0.29', '0.14',
'0.06', '0.32', '0.45', '0.53', '0.38', '0.6', '0.45', '0.57',
'0.28', '0.71', '0.53', '0.49', '0.3', '0.38', '0.28', '0.46',
'0.26', '-0.07', '0.05', '0.3', '0.17', '0.18', '0.33', '0.43',
'0.35', '0.3', '0.56', '0.46', '0.52', '0.6', '0.59', '0.47',
'0.38', '0.39', '0.38', '0.38', '0.49', '0.54', '0.49', '0.3',
'0.46', '0.56', '0.55', '0.63', '0.43', '0.45', '0.41', '0.7',
'0.47', '0.12', '0.48', '0.1', '0.34', '0.11', '0.62', '0.36',
'0.45', '0.2', '0.2', '0.36', '0.18', '0.0', '0.18', '0.09',
'0.29', '0.13', '0.23', '0.22', '0.24', '0.01', '0.1', '0.01',
'0.19', '-0.04', '0.02', '0.65', '0.72', '0.15', '0.1', '0.14',
'0.28', '0.11', '0.05', '0.22', '0.24', '0.03', '0.03', '0.19',
'0.26', '0.53', '0.26', '0.42', '0.69', '0.5', '0.05', '0.33',
'0.64', '0.49', '0.54', '0.66', '0.42', '0.58', '0.73', '0.8',
'0.83', '0.7', '0.47', '0.75', '0.83', '0.66', '0.76', '0.53',
'0.11', '0.34', '0.23', '0.68', '0.55', '0.69', '0.49', '0.18',
'0.23', '0.19', '0.23', '0.09', '0.14', '0.0', '0.08', '-0.08',
'0.42', '0.46', '0.28', '0.21', '0.06', '0.22', '0.41', '0.46',
'0.32', '0.1', '0.16', '0.13', '0.77', '0.45', '0.5', '0.7',
'0.67', '0.81', '0.49', '0.32', '0.51', '0.47', '0.22', '0.32',
'0.77', '0.21', '0.7', '0.44', '0.59', '0.56', '0.46', '0.43',
'0.52', '0.54', '0.4', '0.0', '0.44', '0.34', '0.23', '0.34',
'0.11', '0.39', '0.6', '0.09', '0.32', '0.34', '0.16', '0.12',
'0.14', '0.21', '0.07', '0.19', '0.04', '0.19', '0.38', '0.37',
'0.33', '0.41', '0.41', '0.61', '0.46', '0.58', '0.4', '0.48',
'0.41', '0.25', '0.13', '0.11', '0.01', '0.2', '0.13', '0.2',
'0.38', '0.34', '0.31', '0.39', '0.47', '0.28', '0.48', '0.61',
'0.6', '0.48', '0.62', '0.67', '0.41', '0.45', '0.46', '0.63',
'0.5', '0.5', '0.48', '0.46', '0.1', '0.53', '0.66', '0.48',
'0.52', '0.54', '0.55', '0.55', '0.4', '0.21', '0.44', '0.1',
'-0.02', '0.03', '0.47', '0.43', '0.49', '0.4', '0.22', '0.27',
'0.17', '0.13', '0.15', '0.16', '0.08', '0.18', '0.22', '0.34',
'0.31', '0.08', '0.23', '0.11', '0.15', '0.03', '0.11', '0.46',
'0.65', '0.0', '0.1', '0.06', '0.01', '0.0', '0.31', '0.09',
'0.27', '0.01', '0.26', '0.23', '0.3', '0.47', '0.35', '0.34',
'0.4', '-0.08', '0.14', '0.14', '0.6', '0.7', '0.22', '0.3', '0.4',
'0.38', '0.47', '0.66', '0.36', '0.22', '0.38', '0.6', '0.67',
'0.32', '0.81', '0.24', '0.13', '0.24', '0.0', '0.66', '0.6',
'0.62', '0.36', '0.16', '0.04', '0.21', '0.13', '0.1', '0.42',
'-0.01', '0.01', '0.09', '0.28', '0.53', '0.61', '0.09', '0.07',
'0.09', '0.11', '0.28', '0.08', '0.24', '0.21', '0.19'],
dtype='<U5')
results
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np.str_('-0.07'): <nilearn.glm.regression.RegressionResults at 0x7d52478fc290>,
np.str_('-0.08'): <nilearn.glm.regression.RegressionResults at 0x7d523efc1f70>,
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