Summary of what happened:
Dear experts,
When I checked the fmriprep result. I found “SliceTimingCorrected”: false in the JSON file. And I checked other posts on Neurstar https://neurostars.org/t/questions-regarding-fmri-preprocessing-with-fmriprep-resolution-time-points-and-dimensions/27947, I think it has some problems. But, the whole process of fmriprep ended smoothly, with no apparent errors being generated. What’s the most likely cause of this problem?
Looking forward to your reply. Thanks advance.
Command used (and if a helper script was used, a link to the helper script or the command generated):
singularity run --cleanenv \
-B "${work_dir}":/work_dir \
-B "${bids_dir}":/bids_dir \
-B "${output_dir}":/output \
-B "${freesurfer_license_folder}":/freesurfer_license \
"${path_to_singularity_image}" \
/bids_dir \
/output \
participant --participant-label "${subjID}" \
--work-dir work_dir/${subjID} \
--fs-license-file /freesurfer_license/license.txt \
--output-spaces MNI152NLin2009cAsym T1w \
--dummy-scans 4 \
--skip_bids_validation \
--notrack \
--stop-on-first-crash
Version:
24.1.0
Environment (Docker, Singularity / Apptainer, custom installation):
Singularity
Screenshots / relevant information:
