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QSIPrep 1.0.2 SynthSeg failure
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5
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298
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November 21, 2025
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Template script for running qsiprep then qsirecon?
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7
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133
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November 20, 2025
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TractSeg Producing Empty Tractograms from QSIPrep Outputs
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1
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111
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November 19, 2025
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XCP-D error output: Can't find anatomical image
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8
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382
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November 16, 2025
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3dTshift in fMRIPrep
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1
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129
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November 16, 2025
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How to correct free water with one shell value dwi imaging
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4
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173
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November 14, 2025
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Issues registering FA map from MRtrix to MNI space (qform_code/sform_code differences vs DIPY output)
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0
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94
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November 14, 2025
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Co-registration of MRI to Allen Mouse Brain Atlas
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3
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189
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November 14, 2025
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Longitudinal flag
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2
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121
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November 13, 2025
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SliceTiming question
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3
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160
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November 13, 2025
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QSIPrep error merge_dwis
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22
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758
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November 13, 2025
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Inconsistent image intensity in the averaged fMRI images for coregistrations across runs
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8
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250
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November 13, 2025
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RuntimeError: Input inhomogeneity-corrected data seems empty with MRIQC
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4
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1494
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November 12, 2025
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Fieldmaps recognition
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2
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162
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November 12, 2025
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fMRIPrep brain mask and tpm errors
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2
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130
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November 12, 2025
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Psychopy task not recording reaction time when button is pressed during specific frame
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0
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89
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November 11, 2025
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Weird brain mask from ASLPrep
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3
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226
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November 10, 2025
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Nipype workflow m0scan recognition for calibration in ASLPrep
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2
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140
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November 10, 2025
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fMRI decoding in block design
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3
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170
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November 10, 2025
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I can't login to openneuro cli using Ubuntu WSL on Windows 11
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2
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182
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November 7, 2025
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fMRIPrep: how to incorporate pre-run freesurfer?
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18
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9214
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November 6, 2025
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Medial wall masking (or not) in fMRIPrep 25.1.0, fsaverage5
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2
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200
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November 5, 2025
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fMRIPrep anatomical image processing error
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3
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260
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November 4, 2025
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Accessing built-in pyAFQ white matter tracts (optic tract/nerve)
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0
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130
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November 3, 2025
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Implementing FD based frame censoring in SPM12
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2
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198
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November 1, 2025
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How to compute node-wise custom metrix (like FD/ICVF/ODI) after QSIRecon-pyAFQ?
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3
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237
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October 31, 2025
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fMRIPrep - Poorly Aligned bold2anat Registration
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5
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361
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October 30, 2025
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Question about handling dummy scans with fMRIPrep
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2
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273
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October 30, 2025
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fMRIPrep in neurodesk BrokenProcessPool error
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4
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184
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October 28, 2025
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Normalization and group-averaging of count connectivity matrices from QSIRecon (mrtrix_multishell_msmt_ACT-fast)
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12
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308
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October 28, 2025
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