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Question about handling dummy scans with fMRIPrep
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2
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286
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October 30, 2025
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fMRIPrep in neurodesk BrokenProcessPool error
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4
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199
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October 28, 2025
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Normalization and group-averaging of count connectivity matrices from QSIRecon (mrtrix_multishell_msmt_ACT-fast)
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12
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331
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October 28, 2025
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QSIPrep not using all fieldmaps for specified DWI scan
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5
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245
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October 28, 2025
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XCP-D boilerplate clarifications
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1
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164
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October 28, 2025
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How to use .trk file produced by QSIRecon with "----recon_spec pyafq_tractometry" to extract properties of custom fMRI imaging
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3
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182
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October 28, 2025
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FSL: repeated measures in FEAT/FSL
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3
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276
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October 27, 2025
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Crash during connectivity matrix
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6
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195
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October 27, 2025
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FSL BET fails on T2 images with GBM tumor, removes part of the brain
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1
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196
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October 26, 2025
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ADNI baseline dataset selection issue (IDA-platform)
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0
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238
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October 24, 2025
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What happens if I push to the wrong RIA sibling?
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0
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229
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October 22, 2025
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Probability maps in qsirecon pyafq pipeline
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2
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258
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October 21, 2025
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Error with FSL lesion_filling: "Incompatible number of valid voxels and matrix columns in setmatrix()"
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1
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134
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October 21, 2025
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How can I improve ants brain extraction performance?
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2
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429
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October 20, 2025
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ASLPrep 25.1.0 using mri_coreg
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3
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308
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October 20, 2025
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Gradient nonlinearity correction for Siemens: Best practices for HCP pipelines vs fMRIPrep
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1
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229
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October 20, 2025
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Gibbs unringing uncertainty
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5
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296
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October 18, 2025
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fMRIPrep fieldmap correction not working when specifying B0FieldIdentifier and B0FieldSource
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10
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354
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October 16, 2025
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How to use DIPY BUndle ANalytics (BUAN) for pyAFQ Tractometry?
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6
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1536
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October 16, 2025
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Help with bids filter file
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3
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321
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October 16, 2025
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Can't find the TR of data (CPAC)
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2
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235
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October 16, 2025
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Error "stack smashing detected" (Signal 6) in Step 1 Longitudinal Processing
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0
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173
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October 16, 2025
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XCP-D misaligned in summary report
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4
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305
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October 15, 2025
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Framewise_displacement values and outliers.tsv entries in XCP-D
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9
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315
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October 14, 2025
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Smoothing Surface Based Data
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0
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182
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October 14, 2025
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Using custom brainmask to reconstruct brain surface (freesurfer mri_watershed)
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0
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343
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October 14, 2025
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Tips on Minimizing Time Usage
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0
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189
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October 14, 2025
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Lesion mask potentially not used (fmriprep 23.0.2)
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1
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325
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October 14, 2025
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Distortion correction
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2
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459
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October 13, 2025
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XCP-D parcellation and connectivity failures — possible mismatch in fMRIPrep output spaces (MNI152NLin2009cAsym vs MNI152NLincAsym)
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2
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294
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October 13, 2025
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