Neuro Questions


Topic Replies Activity
T2w in BIDs format 2 August 25, 2019
Running first level analysis with varying number of different trial_types per run 2 August 25, 2019
Real-time fMRI processing pipeline with Python, nipype and/or other packages 4 August 24, 2019
Fixed-Effects FSL from fMRIPrep 3 August 24, 2019
Registrations and brainmasks 1 August 23, 2019
Nipype: Trait types required for first-level contrasts 1 August 23, 2019
Nilearn CanICA - Extracting from non-overlapping regions 3 August 23, 2019
Fmriprep-1.4.1.sif crashes 1 August 23, 2019
Neurovault: Change Accessability to public 2 August 23, 2019
Using most updated version of fmriprep/niworkflows does not solve problem for traits.trait_errors.TraitError: The 'run' trait of a ReadSidecarJSONOutputSpec problem 5 August 23, 2019
Fmriprep handling of multi-echo data with single-band reference scans 4 August 23, 2019
Fmriprep carpet plot error 9 August 23, 2019
--dummy-scans option on fmriprep functional? 7 August 22, 2019
Fmriprep tcompcor IndexError followed by MemoryError 1 August 22, 2019
Fmriprep: resampling to different MNI-space using template with or without skull? 6 August 22, 2019
BIDS derivatives for freesurfer 7 August 22, 2019
Effect exists only in 1st level for all 10 subjects but not in the 2nd level analysis 7 August 22, 2019
N/A WhiteMatter confounds in TSV output file 6 August 21, 2019
Does this function plot_roi(img, cut_coords, title) transform the coordinates to be in the same space as image before plotting? 6 August 21, 2019
Plot surface error: It is not currently possible to manually set the aspect on 3D axes 2 August 21, 2019
Issues with FMRIPREP V1.3.0.post2 1 August 21, 2019
Fmriprep autorecon31 error using Docker 6 August 21, 2019
Failed to establish a new connection templateflow.s3.amazonaws.com 2 August 20, 2019
Neurosynth Coactivation thresholding at FDR p<.001 2 August 20, 2019
Working with Natus Neuroworks file format and EDF+ file format 5 August 20, 2019
MRIQC Boxplot whisker description? 3 August 19, 2019
fMRIPrep Work Directory Storage Issue 2 August 19, 2019
Output files issue with MCFLIRT (Nipype 1.2.0) 2 August 18, 2019
Nipype having trouble reading files (tutorial) 3 August 17, 2019
Estimating original field map phase maps from phase-difference and magnitude maps 1 August 17, 2019