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Issues registering FA map from MRtrix to MNI space (qform_code/sform_code differences vs DIPY output)
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0
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164
|
November 14, 2025
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A giant bunch of questions about TVB modelling and fitting the empirical resting state FC
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0
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490
|
September 19, 2025
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Registration from FLAIR subject space to dMRI template space
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4
|
327
|
August 12, 2025
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Intersect/zero out DWI voxels with a mask
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7
|
630
|
June 19, 2025
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Two dMRI scans, different FoV error in QSIPrep
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0
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355
|
June 18, 2025
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Custom tractography using pyAFQ and QSIRecon output
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1
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1021
|
May 15, 2025
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TractSeg ValueError: zero-size array to reduction operation minimum which has no identity
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2
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764
|
May 9, 2025
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ANOVA with fixelcfestats
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0
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447
|
May 5, 2025
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FBA template mask creation with subset of participants
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2
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749
|
April 13, 2025
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Tck2fixel matrix containing number of fixels x number of streamlines for thresholding
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0
|
568
|
December 15, 2024
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Tract-wise fixel-based analysis with TractSeg
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8
|
1671
|
December 13, 2024
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Issue with initial preprocessing in BATMAN Pipeline on Philips DWI data (Reverse Phase-Encoding)
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0
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679
|
December 2, 2024
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Is there anyway to use cuda 11 or later for FSL's eddy_cuda?
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6
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3056
|
November 9, 2024
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DWI: Brainstem distorted after preprocessing
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0
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804
|
July 24, 2024
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Topup distortion correction for phase+magnitude DWI data
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4
|
1979
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June 4, 2024
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Problem during recreating same connectivity from MRTrix on DIPY
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3
|
764
|
May 18, 2024
|
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Passing max angle and step size to mrtrix tckgen from qsirecon
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1
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1318
|
May 9, 2024
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Subcorticals overlap with Ribbon.mgz
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0
|
747
|
May 7, 2024
|
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Issue in co-registration of FA data after QSIPrep and DTIfit and its white matter mask via FSL flirt and MRtrix
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1
|
1139
|
May 1, 2024
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Tcksift2 weighs fewer streamlines than expected
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0
|
692
|
April 12, 2024
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Can I use SIFT or SIFT2 with MAP or GQI?
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0
|
618
|
March 28, 2024
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How to create a connectome with ROIs that are not associated with a parcellation to compute FA values
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18
|
3527
|
March 24, 2024
|
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DIPY--MRTRIX piping (filtering dipy streamlines with mrtrix)
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|
9
|
1162
|
March 7, 2024
|
|
DIPY streamline creation with low amplitude FODs
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0
|
740
|
February 23, 2024
|
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Putting mrtrix tractography into pyAFQ
|
|
15
|
2808
|
December 3, 2023
|
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Mrtrix3 on 'Preprocessed Recommended' HCP (aging/development, BANDA) diffusion data
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0
|
1079
|
October 22, 2023
|
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How to convert .mif file to dt6 format for analysis in AFQ_ComputeTractProperties.m?
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1
|
1315
|
April 27, 2022
|
|
Voxel-wise Structural Connectivity Fingerprints
|
|
9
|
2429
|
July 6, 2021
|
|
GMWMI and Tractography
|
|
4
|
1602
|
March 30, 2021
|