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Custom tractography using pyAFQ and QSIRecon output
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1
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86
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May 15, 2025
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TractSeg ValueError: zero-size array to reduction operation minimum which has no identity
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2
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97
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May 9, 2025
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ANOVA with fixelcfestats
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0
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79
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May 5, 2025
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Intersect/zero out DWI voxels with a mask
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2
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110
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April 25, 2025
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FBA template mask creation with subset of participants
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2
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218
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April 13, 2025
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Tck2fixel matrix containing number of fixels x number of streamlines for thresholding
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0
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192
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December 15, 2024
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Tract-wise fixel-based analysis with TractSeg
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8
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483
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December 13, 2024
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Issue with initial preprocessing in BATMAN Pipeline on Philips DWI data (Reverse Phase-Encoding)
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0
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183
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December 2, 2024
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Is there anyway to use cuda 11 or later for FSL's eddy_cuda?
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6
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1002
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November 9, 2024
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DWI: Brainstem distorted after preprocessing
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0
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343
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July 24, 2024
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Topup distortion correction for phase+magnitude DWI data
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4
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686
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June 4, 2024
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Problem during recreating same connectivity from MRTrix on DIPY
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3
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427
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May 18, 2024
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Passing max angle and step size to mrtrix tckgen from qsirecon
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1
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538
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May 9, 2024
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Subcorticals overlap with Ribbon.mgz
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0
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355
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May 7, 2024
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Issue in co-registration of FA data after QSIPrep and DTIfit and its white matter mask via FSL flirt and MRtrix
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1
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635
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May 1, 2024
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Tcksift2 weighs fewer streamlines than expected
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0
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337
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April 12, 2024
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Can I use SIFT or SIFT2 with MAP or GQI?
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0
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330
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March 28, 2024
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How to create a connectome with ROIs that are not associated with a parcellation to compute FA values
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18
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2172
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March 24, 2024
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DIPY--MRTRIX piping (filtering dipy streamlines with mrtrix)
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9
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610
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March 7, 2024
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DIPY streamline creation with low amplitude FODs
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0
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380
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February 23, 2024
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Putting mrtrix tractography into pyAFQ
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15
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1974
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December 3, 2023
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Mrtrix3 on 'Preprocessed Recommended' HCP (aging/development, BANDA) diffusion data
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0
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743
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October 22, 2023
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How to convert .mif file to dt6 format for analysis in AFQ_ComputeTractProperties.m?
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1
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891
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April 27, 2022
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Voxel-wise Structural Connectivity Fingerprints
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9
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1920
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July 6, 2021
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GMWMI and Tractography
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4
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1326
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March 30, 2021
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