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Custom tractography using pyAFQ and QSIRecon output
|
|
2
|
1380
|
February 5, 2026
|
|
Issues registering FA map from MRtrix to MNI space (qform_code/sform_code differences vs DIPY output)
|
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0
|
235
|
November 14, 2025
|
|
A giant bunch of questions about TVB modelling and fitting the empirical resting state FC
|
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0
|
720
|
September 19, 2025
|
|
Registration from FLAIR subject space to dMRI template space
|
|
4
|
401
|
August 12, 2025
|
|
Intersect/zero out DWI voxels with a mask
|
|
7
|
702
|
June 19, 2025
|
|
Two dMRI scans, different FoV error in QSIPrep
|
|
0
|
425
|
June 18, 2025
|
|
TractSeg ValueError: zero-size array to reduction operation minimum which has no identity
|
|
2
|
897
|
May 9, 2025
|
|
ANOVA with fixelcfestats
|
|
0
|
515
|
May 5, 2025
|
|
FBA template mask creation with subset of participants
|
|
2
|
828
|
April 13, 2025
|
|
Tck2fixel matrix containing number of fixels x number of streamlines for thresholding
|
|
0
|
626
|
December 15, 2024
|
|
Tract-wise fixel-based analysis with TractSeg
|
|
8
|
1880
|
December 13, 2024
|
|
Issue with initial preprocessing in BATMAN Pipeline on Philips DWI data (Reverse Phase-Encoding)
|
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0
|
781
|
December 2, 2024
|
|
Is there anyway to use cuda 11 or later for FSL's eddy_cuda?
|
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6
|
3533
|
November 9, 2024
|
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DWI: Brainstem distorted after preprocessing
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0
|
867
|
July 24, 2024
|
|
Topup distortion correction for phase+magnitude DWI data
|
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4
|
2227
|
June 4, 2024
|
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Problem during recreating same connectivity from MRTrix on DIPY
|
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3
|
810
|
May 18, 2024
|
|
Passing max angle and step size to mrtrix tckgen from qsirecon
|
|
1
|
1489
|
May 9, 2024
|
|
Subcorticals overlap with Ribbon.mgz
|
|
0
|
809
|
May 7, 2024
|
|
Issue in co-registration of FA data after QSIPrep and DTIfit and its white matter mask via FSL flirt and MRtrix
|
|
1
|
1219
|
May 1, 2024
|
|
Tcksift2 weighs fewer streamlines than expected
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0
|
828
|
April 12, 2024
|
|
Can I use SIFT or SIFT2 with MAP or GQI?
|
|
0
|
662
|
March 28, 2024
|
|
How to create a connectome with ROIs that are not associated with a parcellation to compute FA values
|
|
18
|
3910
|
March 24, 2024
|
|
DIPY--MRTRIX piping (filtering dipy streamlines with mrtrix)
|
|
9
|
1293
|
March 7, 2024
|
|
DIPY streamline creation with low amplitude FODs
|
|
0
|
791
|
February 23, 2024
|
|
Putting mrtrix tractography into pyAFQ
|
|
15
|
3200
|
December 3, 2023
|
|
Mrtrix3 on 'Preprocessed Recommended' HCP (aging/development, BANDA) diffusion data
|
|
0
|
1147
|
October 22, 2023
|
|
How to convert .mif file to dt6 format for analysis in AFQ_ComputeTractProperties.m?
|
|
1
|
1382
|
April 27, 2022
|
|
Voxel-wise Structural Connectivity Fingerprints
|
|
9
|
2543
|
July 6, 2021
|
|
GMWMI and Tractography
|
|
4
|
1685
|
March 30, 2021
|