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pyAFQ tractometry fails with CsdNanResponseError on neonatal single-shell data
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2
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47
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March 17, 2026
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How to obtain 28 bundles (pyAFQ) in standard space (MNI) as NIfTI files?
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1
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45
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March 16, 2026
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Custom tractography using pyAFQ and QSIRecon output
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2
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1454
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February 5, 2026
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Re-running pyAFQ segmentation using Recobundles after initial run with AFQ-waypoints
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2
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375
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November 21, 2025
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Accessing built-in pyAFQ white matter tracts (optic tract/nerve)
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0
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321
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November 3, 2025
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How to compute node-wise custom metrix (like FD/ICVF/ODI) after QSIRecon-pyAFQ?
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3
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504
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October 31, 2025
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How to use .trk file produced by QSIRecon with "----recon_spec pyafq_tractometry" to extract properties of custom fMRI imaging
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3
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314
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October 28, 2025
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Probability maps in qsirecon pyafq pipeline
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2
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445
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October 21, 2025
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How to use DIPY BUndle ANalytics (BUAN) for pyAFQ Tractometry?
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6
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2008
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October 16, 2025
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How to combine pyAFQ bundles and MRtrix SIFT2 streamline weight?
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15
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1169
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October 10, 2025
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Tractography on interrupted and/or shifted white matter Tracts(fornix)
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1
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589
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April 30, 2025
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How to interpret different results for streamline count vs. FA values in automated fibre quantification?
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4
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1159
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March 24, 2025
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Looking for Fornix ROI waypoints to use in pyAFQ
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4
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974
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March 20, 2025
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pyAFQ ValueError: No file found with these parameters:
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4
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985
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February 28, 2025
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How to set bundle_info to "default18_bd" in pyAFQ config.toml
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3
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998
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February 11, 2025
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Question about bundles outputted by pyAFQ
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0
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695
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September 26, 2024
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Could you check the pyAFQ API commands?
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4
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1599
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June 24, 2024
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Convert .tck to .trk
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4
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2475
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April 24, 2024
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pyAFQ Cingulum Outputs
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2
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1145
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April 12, 2024
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Clean_bundles directory missing with latest pyAFQ
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2
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1155
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February 23, 2024
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pyAFQ default settings for ODF
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3
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1254
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January 3, 2024
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Putting mrtrix tractography into pyAFQ
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15
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3286
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December 3, 2023
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Resampling to 30 nodes using pyAFQ config file
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1
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967
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November 9, 2023
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Unable to track Right superior longitudinal fasciculus
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0
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701
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October 31, 2023
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Is any method to extract white matter tract profile of a group of subjects and draw a curve?
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5
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1312
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September 5, 2023
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Setting 'brain_mask_definition' in pyAFQ config.toml
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10
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1717
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August 4, 2023
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QSIprep and pyAFQ to generate individual tracts and visualizations
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7
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2128
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June 29, 2023
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How to calculate the FA value of a tract when given tractometry profile?
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4
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2374
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February 6, 2023
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pyAFQ use T1 and Segments
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0
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1015
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June 1, 2022
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How to use 'AFQ.viz.plotly_backend.visualize_bundles' function?
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0
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1198
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May 1, 2022
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