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Custom tractography using pyAFQ and QSIRecon output
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2
|
1478
|
February 5, 2026
|
|
Issues registering FA map from MRtrix to MNI space (qform_code/sform_code differences vs DIPY output)
|
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0
|
252
|
November 14, 2025
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A giant bunch of questions about TVB modelling and fitting the empirical resting state FC
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0
|
762
|
September 19, 2025
|
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Registration from FLAIR subject space to dMRI template space
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4
|
424
|
August 12, 2025
|
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Intersect/zero out DWI voxels with a mask
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7
|
729
|
June 19, 2025
|
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Two dMRI scans, different FoV error in QSIPrep
|
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0
|
437
|
June 18, 2025
|
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TractSeg ValueError: zero-size array to reduction operation minimum which has no identity
|
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2
|
927
|
May 9, 2025
|
|
ANOVA with fixelcfestats
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0
|
536
|
May 5, 2025
|
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FBA template mask creation with subset of participants
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2
|
853
|
April 13, 2025
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Tck2fixel matrix containing number of fixels x number of streamlines for thresholding
|
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0
|
633
|
December 15, 2024
|
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Tract-wise fixel-based analysis with TractSeg
|
|
8
|
1956
|
December 13, 2024
|
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Issue with initial preprocessing in BATMAN Pipeline on Philips DWI data (Reverse Phase-Encoding)
|
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0
|
803
|
December 2, 2024
|
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Is there anyway to use cuda 11 or later for FSL's eddy_cuda?
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6
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3672
|
November 9, 2024
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DWI: Brainstem distorted after preprocessing
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0
|
882
|
July 24, 2024
|
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Topup distortion correction for phase+magnitude DWI data
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4
|
2301
|
June 4, 2024
|
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Problem during recreating same connectivity from MRTrix on DIPY
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3
|
821
|
May 18, 2024
|
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Passing max angle and step size to mrtrix tckgen from qsirecon
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1
|
1524
|
May 9, 2024
|
|
Subcorticals overlap with Ribbon.mgz
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|
0
|
820
|
May 7, 2024
|
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Issue in co-registration of FA data after QSIPrep and DTIfit and its white matter mask via FSL flirt and MRtrix
|
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1
|
1241
|
May 1, 2024
|
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Tcksift2 weighs fewer streamlines than expected
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0
|
850
|
April 12, 2024
|
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Can I use SIFT or SIFT2 with MAP or GQI?
|
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0
|
679
|
March 28, 2024
|
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How to create a connectome with ROIs that are not associated with a parcellation to compute FA values
|
|
18
|
4010
|
March 24, 2024
|
|
DIPY--MRTRIX piping (filtering dipy streamlines with mrtrix)
|
|
9
|
1316
|
March 7, 2024
|
|
DIPY streamline creation with low amplitude FODs
|
|
0
|
803
|
February 23, 2024
|
|
Putting mrtrix tractography into pyAFQ
|
|
15
|
3296
|
December 3, 2023
|
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Mrtrix3 on 'Preprocessed Recommended' HCP (aging/development, BANDA) diffusion data
|
|
0
|
1159
|
October 22, 2023
|
|
How to convert .mif file to dt6 format for analysis in AFQ_ComputeTractProperties.m?
|
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1
|
1404
|
April 27, 2022
|
|
Voxel-wise Structural Connectivity Fingerprints
|
|
9
|
2567
|
July 6, 2021
|
|
GMWMI and Tractography
|
|
4
|
1706
|
March 30, 2021
|