|
Using synthseg with fmriprep?
|
|
0
|
312
|
October 27, 2023
|
|
Comparing Methods: Registering an External Atlas to fsnative vs. Registering fsnative to an External Atlas
|
|
0
|
164
|
October 24, 2023
|
|
Getting fmriprep outputs into fsLR32k space - viewing issue
|
|
7
|
455
|
October 20, 2023
|
|
I built a script that needs MINIMAL user input and runs freesurfer, creates QA images, extracts stats in CSV and runs the longitudinal pipeline. Open access!
|
|
5
|
403
|
October 19, 2023
|
|
Error:autorecon_surfs0 and autorecon_surfs1
|
|
2
|
188
|
October 17, 2023
|
|
FreeSurfer outside fmriprep: longitudinal?
|
|
4
|
585
|
October 5, 2023
|
|
Volume to surface mapping (mri_vol2surf) using fmriprep outputs
|
|
18
|
10946
|
October 4, 2023
|
|
Freesurfer mri_convert
|
|
3
|
256
|
September 29, 2023
|
|
Deeplearning/Neural Network
|
|
0
|
166
|
September 26, 2023
|
|
Transform freesurfer mesh coordinates to volume coordinates
|
|
9
|
1139
|
September 6, 2023
|
|
Qsiprep "freesurfer data is required to make HSVS 5tt image"... does anyone know what these "files" that are needed are?
|
|
7
|
833
|
August 30, 2023
|
|
Using mris_find_flat_regions in freesurfer
|
|
0
|
184
|
August 14, 2023
|
|
Poor freessurfer mask refinement?
|
|
0
|
203
|
August 3, 2023
|
|
Using mri_surf2vol - creating overlay file
|
|
0
|
301
|
July 27, 2023
|
|
fMRIprep stuck in "recon-all -parallel -subjid sub-102311 -sd /output/sourcedata/freesurfer -T2pial -cortribbon"
|
|
3
|
550
|
July 21, 2023
|
|
Cannot allocate memory Fastsurfer recon-surf
|
|
1
|
305
|
July 14, 2023
|
|
Recon-all on multiecho T1 images
|
|
2
|
258
|
June 28, 2023
|
|
Vol2subfield query when extracting stats from DTI images
|
|
1
|
317
|
June 26, 2023
|
|
Fmriprep v22 freesurfer recon-all autorecon1 Talairach transformation failing
|
|
3
|
368
|
June 24, 2023
|
|
Reconall_freesurfer
|
|
5
|
385
|
June 24, 2023
|
|
Soft failures in freesurfer
|
|
3
|
230
|
June 9, 2023
|
|
Need help with masking annot files with nii volumetric file
|
|
0
|
143
|
June 9, 2023
|
|
Some FreeSurfer functions unavailable in nipype Docker container
|
|
0
|
251
|
June 1, 2023
|
|
Convert GIFTI to FreeSurfer Label
|
|
0
|
484
|
May 31, 2023
|
|
Can I skip skull stripping in Freesurfer?
|
|
1
|
510
|
May 24, 2023
|
|
Fmriprep: flair images
|
|
1
|
376
|
May 24, 2023
|
|
Functional anaysis in anatomical ROIs, freesurfer
|
|
0
|
280
|
May 17, 2023
|
|
Extract cortical thickness stats from a new atlas
|
|
3
|
502
|
May 17, 2023
|
|
Question about free surfer conformed MNI image
|
|
0
|
220
|
May 12, 2023
|
|
Error recon-all (mri-convert extra arguments)
|
|
1
|
261
|
May 11, 2023
|