Using synthseg with fmriprep?
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0
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312
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October 27, 2023
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Comparing Methods: Registering an External Atlas to fsnative vs. Registering fsnative to an External Atlas
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0
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164
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October 24, 2023
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Getting fmriprep outputs into fsLR32k space - viewing issue
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7
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455
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October 20, 2023
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I built a script that needs MINIMAL user input and runs freesurfer, creates QA images, extracts stats in CSV and runs the longitudinal pipeline. Open access!
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5
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403
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October 19, 2023
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Error:autorecon_surfs0 and autorecon_surfs1
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2
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188
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October 17, 2023
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FreeSurfer outside fmriprep: longitudinal?
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4
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585
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October 5, 2023
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Volume to surface mapping (mri_vol2surf) using fmriprep outputs
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18
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10946
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October 4, 2023
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Freesurfer mri_convert
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3
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256
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September 29, 2023
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Deeplearning/Neural Network
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0
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166
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September 26, 2023
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Transform freesurfer mesh coordinates to volume coordinates
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9
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1139
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September 6, 2023
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Qsiprep "freesurfer data is required to make HSVS 5tt image"... does anyone know what these "files" that are needed are?
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7
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833
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August 30, 2023
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Using mris_find_flat_regions in freesurfer
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0
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184
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August 14, 2023
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Poor freessurfer mask refinement?
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0
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203
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August 3, 2023
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Using mri_surf2vol - creating overlay file
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0
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301
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July 27, 2023
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fMRIprep stuck in "recon-all -parallel -subjid sub-102311 -sd /output/sourcedata/freesurfer -T2pial -cortribbon"
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3
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550
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July 21, 2023
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Cannot allocate memory Fastsurfer recon-surf
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1
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305
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July 14, 2023
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Recon-all on multiecho T1 images
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2
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258
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June 28, 2023
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Vol2subfield query when extracting stats from DTI images
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1
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317
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June 26, 2023
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Fmriprep v22 freesurfer recon-all autorecon1 Talairach transformation failing
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3
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368
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June 24, 2023
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Reconall_freesurfer
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5
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385
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June 24, 2023
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Soft failures in freesurfer
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3
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230
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June 9, 2023
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Need help with masking annot files with nii volumetric file
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0
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143
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June 9, 2023
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Some FreeSurfer functions unavailable in nipype Docker container
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0
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251
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June 1, 2023
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Convert GIFTI to FreeSurfer Label
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0
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484
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May 31, 2023
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Can I skip skull stripping in Freesurfer?
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1
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510
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May 24, 2023
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Fmriprep: flair images
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1
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376
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May 24, 2023
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Functional anaysis in anatomical ROIs, freesurfer
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0
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280
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May 17, 2023
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Extract cortical thickness stats from a new atlas
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3
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502
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May 17, 2023
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Question about free surfer conformed MNI image
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0
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220
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May 12, 2023
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Error recon-all (mri-convert extra arguments)
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1
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261
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May 11, 2023
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